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Research

Scientific workshops

Workshop on Biophotonics
Jun 18– Jun 26, 2013 Košice, Slovakia

KICK – OFF Meeting


Oct 1– Oct 3, 2013 Štrbské Pleso, Slovakia

Workshop on Biophotonics


Feb 11 - Feb 13, 2014 Demänovská dolina, Slovakia

Workshop on Structural Biology
Feb 11 - Feb 13, 2014 Liptovský Ján, Slovakia

Workshop on Multiscale Modeling
Jul 6 - Jul 9, 2014 Veľká Tŕňa, Slovakia

Workshop on Surface Enhanced Raman Spectroscopy – application in environment monitoring
Oct 21 – Oct 23, 2014 Madrid, Spain

Workshop on Mining Complex Data
Oct 25 - Oct 27, 2014 Košice, Slovakia

Workshop in Biophotonics


April 14 – April 16, 2015  Štrbské Pleso, Slovakia

CELIM Final Meeting


May 10 – May 12, 2016 Košice, Slovakia

Conference

X-ray for cellular imaging
Nov 03– Nov 06, 2015, Nový Smokovec, Slovakia

Publications

  1. Andrej Musatov , Rastislav Varhač , Jonathan P. Hosler , Erik Sedlák, Delipidation of cytochrome c oxidase from Rhodobacter sphaeroides destabilizes its quaternary structure, Biochimie, 2016, Vol. 125
  2. Marco Schütz , Jendrik Schöppe , Erik Sedlák , Matthias Hillenbrand , Gabriela Nagy-Davidescu , Janosch Ehrenmann , Christoph Klenk , Pascal Egloff , Lutz Kummer , Andreas Plückthun, Directed evolution of G protein-coupled receptors in yeast for higher functional production in eukaryotic expression hosts, Scientific Reports, 2016, Vol. 6
  3. Denis Horvath , Branislav Brutovsky, Study of selected phenotype switching strategies in time varying environment, Physics Letters, Section A: General, Atomic and Solid State Physics, 2016, Vol. 380/Issue 13
  4. Denis Horvath , Jozef Ulicny , Branislav Brutovsky, Self-organised manifold learning and heuristic charting via adaptive metrics, Connection Science, 2016, Vol. 28/Issue 1
  5. Valeria Verebova , Dominik Belej , Jaroslava Joniova , Zuzana Jurasekova , Pavol Miskovsky , Tibor Kozar , Denis Horvath , Jana Stanicova , Veronika Huntosova, Deeper insights into the drug defense of glioma cells against hydrophobic molecules, International Journal of Pharmaceutics, 2016, Vol. 503/Issue 1-2
  6. Eduardo Lopez-Tobar , Valeria Verebova , Ludmila Blascakova , Daniel Jancura , Gabriela Fabriciova , Santiago Sanchez-Cortes, Detection and aggregation of the antitumoral drug parietin in ethanol/water mixture and on plasmonic metal nanoparticles studied by surface-enhanced optical spectroscopy: Effect of pH and ethanol concentration, Spectrochimica Acta - Part A: Molecular and Biomolecular Spectroscopy, 2016, Vol. 159
  7. J. Varchola , K. Želonková , D. Chorvat Jr , D. Jancura , P. Miskovsky , G. Bánó, Singlet oxygen produced by quasi-continuous photo-excitation of hypericin in dimethyl-sulfoxide, Journal of Luminescence, 2016, Vol. 177
  8. M. Misuth, J. Joniova, D. Belej, S. Hrivnak, D. Horvath, V. Huntosova, Estimation of PKCδ autophosphorylation in U87 MG glioma cells: combination of experimental, conceptual and numerical approaches, Journal of Biophotonics, 2016
  9. Zuzana Jurasekova , Veronika Huntosova , Dominik Belej , Pavol Miskovsky , Daniel Jancura, Human Serum Albumin-[Ru(Phen)3]2+ Complex Formation Studied by Optical Spectroscopies, Biophysical Journal, 2016,  Vol. 110/Issue 3,48a
  10. Katarina Stroffekova , Veronika Huntosova , Marta Novotova , Zuzana Nichtova , Tibor Kozar , Pavol Miskovsky, Dark Hypericin Affects Several Sub-Cellular Levels, Biophysical Journal, 2016,  Vol. 110/Issue 3, 470a
  11. Jaroslava Joniova , Alena Strejčková , Matúš Rebič , Veronika Huntosova , Jana Staničová , Daniel Jancura , Pavol Miskovsky , Gregor Bánó, Hypericin Aggregation in Artificial Lipid Membranes, Biophysical Journal, 2016,  Vol. 110/Issue 3, 72a
  12. Lenka Koptasikova , Veronika Huntosova , Emmanuel Gerelli , Pavol Miskovsky , Georges Wagnieres , Katarina Stroffekova, Study of the NIR Light Induced Effects on Neuroblastoma N2A Cells with Parkinson's-Like Features, Biophysical Journal, 2016,  Vol. 110/Issue 3, 470a-471a
  13. Veronika Huntosova , Dominik Belej , Emmanuel Gerelli , Pavol Miskovsky , Georges Wagnieres, Use of Water-Soluble Oxygen Sensors to Study the Oxygen Consumption during Photosensitization with Hypericin in Vitro and in Vivo, Biophysical Journal, 2016,  Vol. 110/Issue 3, 507a-508a
  14. Dominik Belej , Erik Sedlak , Gabriela Fabriciova , Daniel Jancura, Thermal Stability of Human Serum Albumin: the Dependence on the Protein Concentration, Scan Rate, and the Presence of Fatty Acids and Low-Weight Molecular Ligands, Biophysical Journal, 2016,  Vol. 110/Issue 3, 211a
  15. Erik Sedlak , Jonas V. Schaefer , Andreas Pluckthun, Modulation of the Kinetic Stability of Immunoglobulin G by Solvent Additives, Biophysical Journal, 2016, Vol. 110/Issue 3, 211a-212a
  16. Zuzana Nadova , Lenka Lenkavska , Alexandra Fragola , Stephanie Bonneau , Franck Sureau , Pavol Miskovsky, Correlation between Mitochondrial Morphology and Functionality after Oxidative Stress, Biophysical Journal, 2016,  Vol. 110/Issue 3, 470a
  17. Magda Dettlaff , Magdalena Lemańska , Gabriel Semanišin , Rita Zuazua, Some variations of perfect graphs, Discussiones Mathematicae - Graph Theory, 2015
  18. Erik Sedlák and Neal C. Robinson, Destabilization of the Quaternary Structure of Bovine Heart Cytochrome c Oxidase upon Removal of Tightly Bound Cardiolipin, Biochemistry, 2015, 54 (36), pp 5569–5577
  19. Rastislav Varhača, Dagmar Sedlákováb, Marek Stupákc, Erik Sedlák, Non-two-state thermal denaturation of ferricytochrome c at neutral and slightly acidic pH values, Biophysical Chemistry 203–204 (2015) 41–50
  20. Slavomíra Poniková, Andrea Antošová, Erna Demjén, Dagmar Sedláková, Jozef Marek, Rastislav Varhač, Zuzana Gažová , Erik Sedlák, Lysozyme stability and amyloid fibrillization dependence on Hofmeister anions in acidic pH, J Biol Inorg Chem (2015) 20:921–933
  21. Sedlák E, Schaefer JV, Marek J, Gimeson P, Plückthun A, Advanced analyses of kinetic stabilities of iggs modified by mutations and glycosylation, Protein Science (2015) 24:1100 - 1113
  22. Gaszton Vizsnyiczai, Tamás Lestyán, Jaroslava Joniova, Badri L. Aekbote, Alena Strejčková, Pál Ormos, Pavol Miskovsky, Lóránd Kelemen, and Gregor Bánó, Optically Trapped Surface-Enhanced Raman Probes Prepared by Silver Photoreduction to 3D Microstructures, Langmuir 2015, 31, 10087−10093
  23. Jozef Černák, Geir Helgesen, Erik Čižmár, Jozef Kováč, Zuzana Jurašeková, and Josef Voltr, Magnetic properties of graphene nanodisk and nanocone powders at low temperatures, Phys. Rev. B 92, 155429
  24. Branislav Brutovsky and Denis Horvath, Towards inverse modeling of intratumor heterogeneity, Open Physics. Volume 13, Issue 1
  25. J. Kubacková, G. Fabriciová, P. Miškovský, D. Jancura, S. Sanchez-Cortes, Sensitive Surface-Enhanced Raman Spectroscopy (SERS) Detection of Organochlorine Pesticides by Alkyl Dithiol-Functionalized Metal Nanoparticles-Induced Plasmonic Hot Spots, Analytical Chemistry 87(1) 2015
  26. M. Rebič, F. Mocci, A. Laaksonen, J. Uličný, Multiscale Simulations of Human Telomeric G-Quadruplex DNA, Journal of Physical Chemistry B 119(01) 2015
  27. E. Sedlák, R. Varhač, A. Musatov, N. C. Robinson, The Kinetic Stability of Cytochrome c Oxidase: Effect of Bound Phospholipid and Dimerization , Biophysical Journal 107(12) 2014
  28. V. Huntošová, K. Štroffeková, G. Wagnieres, M. Novotová, Z. Nichtova, P. Miškovský, Endosomes: guardians against [Ru(Phen)3]2+ photo-action in endothelial cells during in vivo pO2 detection?, Metallomics 6(12) 2014
  29. D. Horváth, Z. Maliková, M. Lukaničová, The policy-dependent statistics and induced heterogeneity of the supported agents on the inter and intra company levels, International Journal of Modern Physics C1 2014
  30. J. Varchola, V. Huntošová, D. Jancura, G. Wagnieres, P. Miškovský, G. Bánó, " Temperature and oxygen-concentration dependence of singlet oxygen production by RuPhen as induced by quasi-continuous excitation", Photochemical and Photobiological Sciences 13(12) 2014
  31. J. Joniová, M. Mišuth, F. Sureau, P. Miškovský, Z. Naďová, Effect of PKCα expression on Bcl-2 phosphorylation and cell death by hypericin, Apoptosis 19(12) 2014
  32. J. Joniová, Ľ. Burianková, D. Buzová, P. Miškovský, D. Jancura, Kinetics of incorporation/redistribution of photosensitizer hypericin to/from high-density lipoproteins, International Journal of Pharmaceutics 475(1-2) 2014
  33. B. Brešar, R. Krivoš-Belluš, G. Semanišin, P. Šparl, On the weighted k-path vertex cover problem, Discrete Applied Mathematics 177
  34. V. Huntošová, S. Gay, P. Nowak-Sliwinska, S. Kumar Rajendran, M. Zellweger, H. van den Bergh, G. Wagnieres, In vivo measurement of tissue oxygenation by time-resolved luminescence spectroscopy: advantageous properties of dichlorotris(1, 10-phenanthroline)-ruthenium(II) hydrate, Journal of Biomedical Optics 19(7) 2014
  35. D. Jancura, J. Staničová, G. Palmer, M. Fabián, How Hydrogen Peroxide Is Metabolized by Oxidized Cytochrome c Oxidase, Biochemistry 53(22) 2014
  36. Z. Jurašeková , C. Domingo , J. V. Garcia-Ramos , S. Sanchez-Cortes, Effect of pH on the chemical modification of quercetin and structurally related flavonoids characterized by optical (UV-visible and Raman) spectroscopy, Physical Chemistry Chemical Physics 16 (25) 2014
  37. L. Dzurová, D. Petrovajova, Z. Naďová, V. Huntošová, P. Miškovský, K. Štroffeková, The role of anti-apoptotic protein kinase Cα in response to hypericin photodynamic therapy in U-87 MG cells, Photodiagnosis and Photodynamic Therapy 11(2) 2014
  38. J. Kubacková, I. Izquierdo-Lorenzo, D. Jancura, P. Miškovský, S. Sanchez-Cortes, Adsorption of linear aliphatic α,ω-dithiols on plasmonic metal nanoparticles: a structural study based on surface-enhanced Raman spectra, Physical Chemistry Chemical Physics 16(23) 2014
  39. M. A. Omar, P. Miškovský, G. Bánó, Proof-of-principle for simple microshelter-assisted buffer exchange in laser tweezers: interaction of hypericin with single cells, Lab on a Chip - Miniaturisation for Chemistry and Biology 14(9) 2014
  40. I. Čavarga, B. Bilčík, P. Výboh, M. Záškvarková, D. Chorvát, P. Kasák, P. Mlkvý, A. Mateašík, A. Chorvátová, P. Miškovský, Photodynamic Effect of Hypericin after Topical Application in the Ex Ovo Quail Chorioallantoic Membrane Model, Planta Medica 80(1) 2014
  41. V. Verebová, J. Adamčík, P. Danko, D. Podhradský, P. Miškovský, J. Staničová, Anthraquinones quinizarin and danthron unwind negatively supercoiled DNA and lengthen linear DNA, Biochemical and Biophysical Research Communications 444(1) 2014
  42. T. Tokár , J. Uličný, The Mathematical Model of the Bcl-2 Family Mediated MOMP Regulation Can Perform a Non-Trivial Pattern Recognition, PLoS One 8(12) 2013
  43. T. Tokár, Z. Turčan, J. Uličný, Boolean network-based model of the Bcl-2 family mediated MOMP regulation, Theoretical Biology and Medical Modelling 10(1) 2013
  44. I. Izquierdo-Lorenzo , J. Kubacková , D. Manchon , A. Mosset , E. Cottancin , S. Sanchez-Cortes, Linking Ag Nanoparticles by Aliphatic α,ω-Dithiols: A Study of the Aggregation and Formation of Interparticle Hot Spots, Journal of Physical Chemistry C 117(31) 2013
  45. L. Balogová, M. Maslaňáková, L. Dzurová, P. Miškovský, K. Štroffeková, Bcl-2 proapoptotic proteins distribution in U-87 MG glioma cells before and after hypericin photodynamic action, General Physiology and Biophysics 32(2) 2013
  46. D. Petrovajová, D. Jancura, P. Miškovský, D. Chorvát Jr., A. Chorvátová, X. Ragas, M. Garcia-Diaz, S. Nonell, Z. Naďová, Monitoring of singlet oxygen luminescence and mitochondrial autofluorescence after illumination of hypericin/mitochondria complex: a time-resolved study , Laser Physics Letters 10(7) 2013

 

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